Package: sparsevb 0.1.0
sparsevb: Spike-and-Slab Variational Bayes for Linear and Logistic Regression
Implements variational Bayesian algorithms to perform scalable variable selection for sparse, high-dimensional linear and logistic regression models. Features include a novel prioritized updating scheme, which uses a preliminary estimator of the variational means during initialization to generate an updating order prioritizing large, more relevant, coefficients. Sparsity is induced via spike-and-slab priors with either Laplace or Gaussian slabs. By default, the heavier-tailed Laplace density is used. Formal derivations of the algorithms and asymptotic consistency results may be found in Kolyan Ray and Botond Szabo (2020) <doi:10.1080/01621459.2020.1847121> and Kolyan Ray, Botond Szabo, and Gabriel Clara (2020) <arxiv:2010.11665>.
Authors:
sparsevb_0.1.0.tar.gz
sparsevb_0.1.0.zip(r-4.7)sparsevb_0.1.0.zip(r-4.6)
sparsevb_0.1.0.tgz(r-4.6-x86_64)sparsevb_0.1.0.tgz(r-4.6-arm64)
sparsevb_0.1.0.tar.gz(r-4.7-arm64)sparsevb_0.1.0.tar.gz(r-4.7-x86_64)sparsevb_0.1.0.tar.gz(r-4.6-arm64)sparsevb_0.1.0.tar.gz(r-4.6-x86_64)
sparsevb_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
sparsevb/json (API)
| # Install 'sparsevb' in R: |
| install.packages('sparsevb', repos = c('https://gabriel-clara.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://gitlab.com/gclara/varpack
Last updated from:458c2ef574. Checks:8 NOTE, 2 OK, 3 FAIL. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | NOTE | 144 | ||
| linux-devel-x86_64 | NOTE | 151 | ||
| source / vignettes | OK | 191 | ||
| linux-release-arm64 | NOTE | 134 | ||
| linux-release-x86_64 | NOTE | 181 | ||
| macos-release-arm64 | NOTE | 228 | ||
| macos-release-x86_64 | NOTE | 456 | ||
| macos-oldrel-arm64 | FAIL | 129 | ||
| macos-oldrel-x86_64 | FAIL | 180 | ||
| windows-devel | NOTE | 162 | ||
| windows-release | NOTE | 138 | ||
| windows-oldrel | FAIL | 76 | ||
| wasm-release | OK | 121 |
Exports:svb.fit
Dependencies:adaptMCMCcodacodetoolsforeachglmnetintervalsiteratorslatticeMASSMatrixramcmcRcppRcppArmadilloRcppEigenRcppEnsmallenselectiveInferenceshapesurvival
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| sparsevb: Spike-and-Slab Variational Bayes for Linear and Logistic Regression | sparsevb-package sparsevb |
| Fit Approximate Posteriors to Sparse Linear and Logistic Models | svb.fit |
